Elastix controller

class library.controller.elastix_controller.ElastixController

Bases: object

Controller class for the elastix table

Args:

Controller (Class): Parent class of sqalchemy session

add_elastix_row(animal, section, rotation, xshift, yshift, metric=0)

adding a row in the elastix table

Parameters

• animal – (str) Animal ID

• section – (str) Section Number

• rotation – float

• xshift – float

• yshift – float

check_elastix_metric_row(animal, section)

checks that a given elastix row exists in the database

Parameters

• (str) (animal) – Animal ID

• (int) (section) – Section Number

Return bool

if the row in question exists

check_elastix_row(animal, section)

checks that a given elastix row exists in the database

Parameters

animal – (str): Animal ID

Section (int)

Section Number

Return boolean

if the row in question exists

get_elastix_row(animal, section)

gets a given elastix row exists in the database

Parameters

animal – (str): Animal ID

Section (int)

Section Number

Iteration (int)

Iteration, which pass are we working on.

Return boolean

if the row in question exists

update_elastix_row(animal, section, updates)

Update a row

Parameters

• animal – (str) Animal ID

• section – (str) Section Number

• updates – dictionary of column:values to update