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Preprocessing pipeline

  • Brain data ingestion processing steps
  • Masking scripts
  • Pipeline scripts
  • Registration scripts
  • Pipeline Utilities
  • High level description of the preprocessing pipeline
  • Overview of the pipeline utility process
  • Software installation
  • Running the entire process - HOWTO
  • Database models
  • SQL Controllers
  • File manipulation modules
  • Cell labeling scripts
  • Atlas creation
Brainsharer Pipeline
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