Brainsharer documentation

Neuroglancer documentation: neuroglancer link.

Pre-processing pipeline documentation: pipeline link.

Database portal documentation: portal link.

Preprocessing pipeline documentation

These pages contain documentation for the Kleinfeld lab’s brain preprocessing pipeline. Specifically, the documentation includes:

• A description of all necessary modules, classes and methods.

• A high level description of the pipeline (non technical documentation).

• A description of all the steps in the process (technical documentation).

• Instructions on installing the necessary software.

• A HOWTO set of instructions to run the actual steps of the pipeline.

Use the side navigation panel to view different documentation topics within this topic.

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Indices and modules

• Index

• Module Index