Python Module Index

l | m | p | r


	l
	`labeling`
	`labeling.scripts.create_labels`
	`library`
	`library.controller.animal_controller`
	`library.controller.elastix_controller`
	`library.controller.histology_controller`
	`library.controller.scan_run_controller`
	`library.controller.sections_controller`
	`library.controller.slide_tif_controller`
	`library.controller.sql_controller`
	`library.database_model.animal`
	`library.database_model.atlas_model`
	`library.database_model.elastix_transformation`
	`library.database_model.histology`
	`library.database_model.scan_run`
	`library.database_model.slide`
	`library.image_manipulation.czi_manager`
	`library.image_manipulation.elastix_manager`
	`library.image_manipulation.filelocation_manager`
	`library.image_manipulation.histogram_maker`
	`library.image_manipulation.image_cleaner`
	`library.image_manipulation.mask_manager`
	`library.image_manipulation.meta_manager`
	`library.image_manipulation.neuroglancer_manager`
	`library.image_manipulation.normalizer_manager`
	`library.image_manipulation.parallel_manager`
	`library.image_manipulation.pipeline_process`
	`library.image_manipulation.precomputed_manager`
	`library.image_manipulation.prep_manager`
	`library.image_manipulation.tiff_extractor_manager`
	`library.utilities.utilities_mask`
	`library.utilities.utilities_process`
	`library.utilities.utilities_registration`

	m
	`masking`
	`masking.scripts.create_masks`

	p
	`pipeline`
	`pipeline.scripts.create_pipeline`

	r
	`registration`
	`registration.scripts.stack2volume2atlas`